Insertion junction: CLIP2.036175_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036175
Chromosome:chromosome 11
Location:1505482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468900 FAP404 Flagellar Associated protein 404 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGCCCTTCCGAGGTCCAGGCCCTTCCAGGCAAAGGTTGTATGTGCGG
Internal bar code:ATGAGGTGGGACTGGGCAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCACACACTCTAGCCAA
Suggested primer 2:ACCCACTATTGTGCTGCCTC