Insertion junction: CLIP2.036175_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036175
Chromosome:chromosome 13
Location:3191976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585250 (1 of 1) PF08005 - PHR domain (PHR) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGACACAGTCATCACAGCCGGCGTCACCGTGCACTTCCACCCCTGGGA
Internal bar code:CTGGTTCCATTAGCGATGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1472
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCACGTATCATCACCCGC
Suggested primer 2:GGAGAAGGAGAGGGAGGAGG