Insertion junction: CLIP2.036181_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036181
Chromosome:chromosome 1
Location:6636423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047265 PHC52 (1 of 1) IPR000772//IPR003882//IPR024616 - Ricin B, lectin domain // Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 52 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCGGGGCCGCCCTCGCGCGGGCAGGCGCTCCAAACAATGGGCGTGCG
Internal bar code:TTGCGTCGTGATAGACGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCCAGATGGGCATCGTG
Suggested primer 2:TGGGAGAGGGCAGGTAGATC