Insertion junction: CLIP2.036187_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036187
Chromosome:chromosome 3
Location:2772324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161578 (1 of 6) IPR015893 - Tetracycline transcriptional regulator, TetR-like, C-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACACGGAAAGCTGTTCGCTGGACAGGGCACGACCGTCCTCACACCTG
Internal bar code:CGCCGTATTGAAGAGGCGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3500
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGACGCGGTAAGAGCTGG
Suggested primer 2:CGTCTCCACTGTGTTCAGCT