Insertion junction: CLIP2.036188_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036188
Chromosome:chromosome 5
Location:1234253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800529 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCTGCTACTGCTGCTACTGCTGCTTCCGCCGCAAGAGCTTGGTGC
Internal bar code:TTCTTCAGTGATTTTACGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2176
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTTCTGTCTCTCCAGCGG
Suggested primer 2:CGTCAAAGGTGGTTGTGCAG