Insertion junction: CLIP2.036189_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036189
Chromosome:chromosome 15
Location:371821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00212865

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATTTGTGCGTGTCATCCTTGCGCAGGGGCCATGCTAATCTTCTCTGT
Internal bar code:AGTGCTCTAAGTTATCCTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2185
LEAP-Seq percent confirming:68.9655
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATCACGCTGTGCCATTG
Suggested primer 2:CTGGGGTCATCTACGGATGC