Insertion junction: CLIP2.036198_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036198
Chromosome:chromosome 12
Location:485776
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494500 LF2,CDKI1 Cyclin dependent kinase; (1 of 1) PTHR24056//PTHR24056:SF171 - CELL DIVISION PROTEIN KINASE // CYCLIN-DEPENDENT KINASE 20 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGTGCACCTCGGAGACGAGGCTGAATGCCAAACGCCCGGGTAGGGG
Internal bar code:GGTATACTGTGTGGTATCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2107
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAATGCGCTTCCCACGTG
Suggested primer 2:GCAAACTATGTTGGCGGCAA