Insertion junction: CLIP2.036204_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036204
Chromosome:chromosome 5
Location:1144082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g248401 (1 of 4) 3.4.21.19 - Glutamyl endopeptidase / V8 proteinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTAGCAAAGGAGCGGGCGCCGTCAACGAACCCAGCACCTTGCTTGGCA
Internal bar code:AATATCCGAAGCACACGACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3375
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCTTACAGGGCATGCAT
Suggested primer 2:TCACCGTCTGTTGACAGCTC