Insertion junction: CLIP2.036206_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036206
Chromosome:chromosome 11
Location:586093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGCGACGCTATGATATCCGGGTCGGACTTGCTGGTTCTGCGAGCGGC
Internal bar code:GGACTGTGGCAGCTCGTTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1815
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACTTGCCTTCACTTGC
Suggested primer 2:TTGACCGGTGACACGTACAG