Insertion junction: CLIP2.036225_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036225
Chromosome:chromosome 6
Location:6120867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291350 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAACCCCACGACACAGCATTTACCCTCAATCACATACTTGCCCCGCGT
Internal bar code:CTTCGGGTTTGCCAGGGTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2138
LEAP-Seq percent confirming:95.5224
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCATCTCAGCCTATGTC
Suggested primer 2:GTCGGAAATACGTCGTTGCG