Insertion junction: CLIP2.036234_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036234
Chromosome:chromosome 13
Location:3194521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585250 (1 of 1) PF08005 - PHR domain (PHR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGCGTTACATGACGTTGCGAAAAGAGAGTGCAGGGGCGGAGGGCGG
Internal bar code:TTCATTAACTAACGGACATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGCTCTTACGGTGCTCA
Suggested primer 2:AGCAGGTACTTGACGTCAGC