Insertion junction: CLIP2.036237_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036237
Chromosome:chromosome 17
Location:1650375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707800 SNRK2J (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGCGGCTCATTGACGCAGTACGTGACGCGCAAGTGGAAGGAGACCGG
Internal bar code:GACTCGTTTCAGTTCTTTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2741
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGCACAAGACACCGTGA
Suggested primer 2:AAGTAAAGACCGTGCTGGGG