Insertion junction: CLIP2.036240_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036240
Chromosome:chromosome 6
Location:8169518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00083299

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAATGGTCCAAGGTCGACAAGTTGCTTGTCGCACGCTGCCGCCTGTCA
Internal bar code:TAGTTGATTTTCTCACCAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4912
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATATTGGTGCCAGTGGTGGG
Suggested primer 2:CGGTCGGGTTCTATCTCAGC