Insertion junction: CLIP2.036242_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036242
Chromosome:chromosome 1
Location:7839518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055400 (1 of 1) PF05022 - SRP40, C-terminal domain (SRP40_C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGTTTCAGGGTTTGAGAGGAAGGGCAAGCAGGCGAGGGCGGCGACT
Internal bar code:CAGTTAATGAACGTGGGGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:714
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGAACACGTTCCTCCAA
Suggested primer 2:CCAACGTAACGAGGGGACAA