Insertion junction: CLIP2.036249_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036249
Chromosome:chromosome 16
Location:7537012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683147 (1 of 44) IPR000048 - IQ motif, EF-hand binding site intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAGGAGAGGAGGAACCAGTGACAGGCATGCACGGCCCGCTGTGCCGGA
Internal bar code:ACAATGGGGGACGGAGGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:691
LEAP-Seq percent confirming:17.1429
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCCACCTAGACTGGATC
Suggested primer 2:CGCACGCTCACCTCTGATAT