Insertion junction: CLIP2.036252_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036252
Chromosome:chromosome 12
Location:2467336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507450 SYP4 Trans-Golgi network Qa-SNARE protein; (1 of 1) K08489 - syntaxin 16 (STX16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTCCCCGCCCTCCGCGCACTCACTTGGTCCCCTCGTCCGCCTCCACA
Internal bar code:TTTTATTGTATTATTGATGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:149
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTGGGTTTGTGGGTGT
Suggested primer 2:TGAGCGCGATGATGCAAATG