Insertion junction: CLIP2.036255_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036255
Chromosome:chromosome 14
Location:1867506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619854 ELG35 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 35 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGCCGCTGCAGTTGGGCGAAAACCAGCAGGACTGCGGGCAGGGGGG
Internal bar code:GGATAAGCCCATCATTTTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:276
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGGGAGGAGGAGGAGAA
Suggested primer 2:TCGTCCGCACCATAATCCTG