Insertion junction: CLIP2.036288_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036288
Chromosome:chromosome 11
Location:974835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467663 (1 of 1) IPR002909//IPR014756//IPR019316 - IPT domain // Immunoglobulin E-set // G8 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTACCAAATGTTGTGGAAACGAGCCTTGCATGTATGGCGCTCGTGTG
Internal bar code:GTATTAACCCTGATCGGAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:5034
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGATCCGTGAGAATACCG
Suggested primer 2:TTCTGGCCGAGTTCTGGAAC