Insertion junction: CLIP2.036294_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036294
Chromosome:chromosome 10
Location:5687000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459300 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACAGACAGGCAGGCCAGCCGCACGACTGTCGCAGCGGGTGCACACGCA
Internal bar code:GATATGGAAGGTTCTAGGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1060
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGAAAACATGCTTGTGT
Suggested primer 2:GCGCACTGGCATTCATACAG