Insertion junction: CLIP2.036296_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036296
Chromosome:chromosome 11
Location:624875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467611 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCAGACCCCAAACTCCAAACTCCATGGTATGATGGGCAAACTCCATGG
Internal bar code:GCTAATTCCTTTCCGCCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:330
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCACCATTCGCGTTCTT
Suggested primer 2:ACACATAGACAGGTGTCGCG