Insertion junction: CLIP2.036298_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036298
Chromosome:chromosome 13
Location:1722751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574350 (1 of 4) IPR000719//IPR001245//IPR002290//IPR006189//IPR011009//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // CHASE domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGTCCTCAACGGCTGACTTGGCCACGTTCAGCGAGCGGCGCGCGTC
Internal bar code:CACGGCTTAAAGGTGATTAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2206
LEAP-Seq percent confirming:94.2308
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGACGGCAAGATTAACG
Suggested primer 2:AGCTGTGGATGGTGGAACTG