Insertion junction: CLIP2.036304_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036304
Chromosome:chromosome 12
Location:3929334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515400 (1 of 17) PF08016 - Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCAGCAGATTACGATACCGATGGTGATAAAGGAATTCGGCCAGCTGA
Internal bar code:TCTTTAGACAGTGTCATTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1539
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGATGCAGAACCAGGCTC
Suggested primer 2:CCAACACGCTCAAATGCTCC