Insertion junction: CLIP2.036317_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036317
Chromosome:chromosome 17
Location:1575554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802041 (1 of 82) IPR020846 - Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGAGCGCCAGCACGCGGGGGGCGAGGGAGGGGGCCTTGTTTTCACCGC
Internal bar code:ATGTTCATACATGTTTTTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:226
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGTGATAAAGCCAGCG
Suggested primer 2:CCCCGCTCCCCTTCATAATC