Insertion junction: CLIP2.036326_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036326
Chromosome:chromosome 5
Location:1966194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236216 (1 of 2) PTHR23257//PTHR23257:SF446 - SERINE-THREONINE PROTEIN KINASE // LIM DOMAIN-CONTAINING SERINE/THREONINE-PROTEIN KINASE DDB_G0286997-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTGGTTCGTTTGGGCTGGTATCCACAACCCCTCCCTCCCTTCCTCAC
Internal bar code:AACGTATCGTATTAGGCTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTGCATAAACCCCCGAA
Suggested primer 2:CCTCCCCATACACACACACC