Insertion junction: CLIP2.036332_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036332
Chromosome:chromosome 3
Location:2521265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159550 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGGGTGAGCAGGGCCGTACCTGATTTTACACCGTAGTTAGGGCCCGT
Internal bar code:TTGTTCCAGAAGGGGTCCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1755
LEAP-Seq percent confirming:94.5946
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAAGTGCATATCGCTGC
Suggested primer 2:CGAGATGCCCTCAACACACT