Insertion junction: CLIP2.036345_5

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036345
Chromosome:chromosome 11
Location:468939
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGCATGCGCGCAGCCAGCAGCGGTCGGGTTCGCAGAGGTCCGCTCAGG
Internal bar code:TATGCTCGTAATCTCTAGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:268
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGAGGGCATTGGCTGT
Suggested primer 2:AACAGAAGTGCGCCGAGTAA