Insertion junction: CLIP2.036347_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036347
Chromosome:chromosome 9
Location:6346741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414350 (1 of 3) PF04824//PF04825 - Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8) // N terminus of Rad21 / Rec8 like protein (Rad21_Rec8_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGCATGTACAGGGCACGCCCGGAGCCAGCAGCCTGGGCGCCTGGGCC
Internal bar code:GCTTGTGAAGTTGTATAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTCAGTCCCTCCAGCTC
Suggested primer 2:ATGGAGCTCAGGCCTGACTA