Insertion junction: CLIP2.036348_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036348
Chromosome:chromosome 2
Location:1790021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086750 (1 of 1) PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGGTGGATGCTCCCCGACTTCTCCTCCGCCGGCCTGCCACACGGCC
Internal bar code:TTCATCCCGCCACGCGGAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2054
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTCTCCCTGCCCTTCCT
Suggested primer 2:GCGGCAATCAGTAGCAATGG