Insertion junction: CLIP2.036353_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036353
Chromosome:chromosome 6
Location:2015709
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265350 HTA42,HTA12,HTA11 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGCTGGCCGGCAACGCCGCCCGCGACAACAAGAAGAACCGCATCGT
Internal bar code:TATCGTTTGCTTTGAAAGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:75.9494
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAGTAATATGGGCCCC
Suggested primer 2:AGACTTGTTAATGCGGCGGA