Insertion junction: CLIP2.036353_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036353
Chromosome:chromosome 6
Location:2015712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265350 HTA42,HTA12,HTA11 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCGGTCAGGTACTCAAGCACGGCGGCCAGGTACACGGGCGCGCCGG
Internal bar code:TATCGTTTGCTTTGAAAGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4911
LEAP-Seq percent confirming:81.6901
LEAP-Seq n confirming:116
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:142

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTTGTTAATGCGGCGGA
Suggested primer 2:GCCAGAGTAATATGGGCCCC