Insertion junction: CLIP2.036355_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036355
Chromosome:chromosome 1
Location:506363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003050 SEC8 (1 of 1) PTHR14146:SF0 - EXOCYST COMPLEX COMPONENT 4; Component of the Exocyst Complex CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGGCTGCTGCCGGGTGGGTCCTGGTTCCCTCTTGGTCCGCCTTGTTT
Internal bar code:TGCGGATGTAAGGCGGGATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:650
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATGACCTCTGCCATCTT
Suggested primer 2:TCTTGCCCGTGTTACCTCAG