Insertion junction: CLIP2.036357_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036357
Chromosome:chromosome 1
Location:3539672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023000 PHT1,PHT4A,MFT12,PHT4-1 Sodium-dependent phosphate transporter, major facilitator superfamily; (1 of 3) PTHR11662:SF223 - SODIUM-DEPENDENT PHOSPHATE TRANSPORT PROTEIN 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGCACGTGTGCTCCAGTCCTGCATCCCACCGCCCTGCCGTCCGCAGC
Internal bar code:GCGCGATTTGTGGGGTCAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:40.9091
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTCCCTCTCACTCCCA
Suggested primer 2:CCTCCAAAGCTGAAGCCGTA