Insertion junction: CLIP2.036360_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036360
Chromosome:chromosome 1
Location:7588548
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800139 (1 of 1) IPR026741//IPR026937//IPR027417 - Protein strawberry notch // Strawberry notch, helicase C domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGTCATGTGGTGTGCTGCGCGAGGAGCCCGAGGAGCACAATCCGTAG
Internal bar code:AGCGGCTGCGGTATGTGCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:354
LEAP-Seq percent confirming:34.1463
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTCCGCCTCCTCATGAA
Suggested primer 2:CGTGTGTGTGCGTATTAGCG