Insertion junction: CLIP2.036363_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036363
Chromosome:chromosome 8
Location:3876854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase CDS/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAAACGAGGGAACAAGAGCAACGGGGACATGTCTGAAGTCAAGAAGA
Internal bar code:GCGTTTGCCGTTAGGGTCACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1972
LEAP-Seq percent confirming:97.2603
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAGGGATGTCACCTTG
Suggested primer 2:CTGTATGAGCAGCTCTCCCG