Insertion junction: CLIP2.036365_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036365
Chromosome:chromosome 6
Location:2602261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00026443

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGCGAAAAACGGGAGACTTACTTGAGGCTCCATGCACTCGCGTTTCG
Internal bar code:TCTCCATCAAAGTAAGCATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1583
LEAP-Seq percent confirming:87.7551
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCACCTGGCAGCACTG
Suggested primer 2:GACTTTGCCAACCTGCCTTG