Insertion junction: CLIP2.036368_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036368
Chromosome:chromosome 3
Location:3757329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169350 (1 of 3) IPR007860 - DNA mismatch repair protein MutS, connector domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAATCGGCGAAAGGAAGAGGTACGTGGAAGGCGGCTGGGGCGAGTGG
Internal bar code:GTTGGTCTCTGCATCATGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4461
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAACTGACCATCGACTGA
Suggested primer 2:TTCACTCGCACACAGGGATC