Insertion junction: CLIP2.036368_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036368
Chromosome:chromosome 3
Location:3757334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169350 (1 of 3) IPR007860 - DNA mismatch repair protein MutS, connector domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCGCAACCCGTACACCCGAATGCTGCACTCACCTGCAACGCCAGCAG
Internal bar code:GTTGGTCTCTGCATCATGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1896
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACTCGCACACAGGGATC
Suggested primer 2:GGCAACTGACCATCGACTGA