Insertion junction: CLIP2.036375_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036375
Chromosome:chromosome 3
Location:4906313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178700 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGAGGGTGTGAGCATGTGGGCGTGTGGGCATGTGCAATGGTTTGCCA
Internal bar code:TTATCACGTACAAGTTGTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:725
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGATATGGCCGTGGTG
Suggested primer 2:CCCAAACTAAACCGGACCCA