Insertion junction: CLIP2.036377_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036377
Chromosome:chromosome 9
Location:1241062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400850 CTL4 (1 of 1) PTHR10877//PTHR10877:SF139 - POLYCYSTIN-RELATED // SUBFAMILY NOT NAMED; carbohydrate-binding protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCCATGATTGAGCCGTCCAGGTCAGTTTGCCTCTGTGAGACTGTGC
Internal bar code:TGATGATACGACCGAGACGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCGCCCCAAATCATTT
Suggested primer 2:CGACACCATCAGTACCGAGG