Insertion junction: CLIP2.036384_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036384
Chromosome:chromosome 2
Location:3191811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800211 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGCATGTGTGTGTGTGTGTGTGCGAGTGTGTGTGTGCGAGTGTGTG
Internal bar code:AGGGTTGCCGCAAAGGGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGATTGAGATGCACCCC
Suggested primer 2:CCCACCTCGAAAGTACCACC