Insertion junction: CLIP2.036390_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036390
Chromosome:chromosome 1
Location:4962481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034451 (1 of 1) K14012 - UBX domain-containing protein 1 (SHP1, UBX1, NSFL1C) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGCCGTGCCGTGCACCATAGTTGGTGCGCGTGCACCGAGCCCGATAA
Internal bar code:GATGATTGAAAGTTTAATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4395
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCGAAAACTTCTGCCAA
Suggested primer 2:CAACCTCCTCTTCCAACCCC