Insertion junction: CLIP2.036411_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036411
Chromosome:chromosome 5
Location:2973823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230804 SNF2 SNF2-related ATPase; (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGGTCAATTTGGAATGGGCGTGCACGTGTATGTGTATGTGTGTGTAT
Internal bar code:TGTGCTGGGTTTATGCGCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGTGCACTCATTCACTC
Suggested primer 2:TCGCGCACATCATCTACGAA