Insertion junction: CLIP2.036411_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036411
Chromosome:chromosome 5
Location:2973823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g230804 SNF2 SNF2-related ATPase; (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCTCGCGAAGCCGCACCTACGCACACTCCACGGCCCCCACACCACCA
Internal bar code:TGTGCTGGGTTTATGCGCCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:301
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCGCACATCATCTACGAA
Suggested primer 2:TCCCGTGCACTCATTCACTC