Insertion junction: CLIP2.036412_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036412
Chromosome:chromosome 1
Location:2484094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014500 (1 of 1) PF06293//PF07714 - Lipopolysaccharide kinase (Kdo/WaaP) family (Kdo) // Protein tyrosine kinase (Pkinase_Tyr); Protein tyrosine kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCACCTCGGCGTCGGAGCGGCTCGGGTAAGGCTCCGCGCCGTTGCTAA
Internal bar code:AGGGGGACGAATAATGTGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2044
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTGATGATGTGCGAGC
Suggested primer 2:GCGGCTCCAGAGTCTATGAC