Insertion junction: CLIP2.036419_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036419
Chromosome:chromosome 6
Location:7207325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298750 AOT4 (1 of 9) PF01490 - Transmembrane amino acid transporter protein (Aa_trans); Amino acid transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACACACGTGTGCTGCACCACCTGTCGGCCTCCGCCGCCAGGCCTCCC
Internal bar code:GGATTGCACGCCAGGCTGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3006
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGACGCATAACCCCGTA
Suggested primer 2:AAGTAGAAGCACCACCACCG