Insertion junction: CLIP2.036421_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036421
Chromosome:chromosome 11
Location:3438299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801323 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGGAGAAATCGTGCGTAAACACACCGCATGTGCCTAGGACACTGCTC
Internal bar code:AGCCATCTTTTCGCCTACGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACCAAACGCCAGAACAC
Suggested primer 2:GGCTGTCAACTTTGCTGCAA