Insertion junction: CLIP2.036423_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036423
Chromosome:chromosome 11
Location:517015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467597 (1 of 1) IPR000104//IPR003439//IPR003593//IPR013525//IPR013581//IPR027417 - Antifreeze protein, type I // ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // Plant PDR ABC transporter associated // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGCTGGGGAGGTGGAGGGCGCGTGTGCGTGTCAGATGCTCGAAGTGC
Internal bar code:GCACTTCTAAAGACATCAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:107
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCACACACACACACACA
Suggested primer 2:GCACACACACATATCCCCCA