Insertion junction: CLIP2.036425_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036425
Chromosome:chromosome 6
Location:4236493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278248 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGACATGATGTCCCGCTCGCGAGGCCGCCGGCTCAATGCGATGATGCC
Internal bar code:GTAAGCATGGAATTGGGATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2269
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGTCTGGCGGAGTTGAA
Suggested primer 2:AGTCGCCTGCATCACGATAG