Insertion junction: CLIP2.036430_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036430
Chromosome:chromosome 12
Location:6620107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538900 (1 of 25) PTHR10516 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACACCCTGCTTGGCCCTGCCTGCAGACAGCACTCATTAAGCAGCGACC
Internal bar code:AGTCCTAGTCGGTCTGTGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3028
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATCTACGTCAGAGGCAC
Suggested primer 2:CGGTTGTGCGGTGTTTTGAT