Insertion junction: CLIP2.036430_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036430
Chromosome:chromosome 12
Location:6620131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538900 (1 of 25) PTHR10516 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATATTACCAGTCGCGTGGCAGACGCGTTGGGTAAGCGCTGGAGCTAGCC
Internal bar code:GATGGGTGTGGCTACGGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2626
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGTGCGGTGTTTTGAT
Suggested primer 2:CGGATCTACGTCAGAGGCAC